SANZO MIYAZAWA: search on Z-Library

The world's largest scientific articles store. 70,000,000+ articles for free.

Don't use scam websites

1

Two types of amino acid substitutions in protein evolution

Takashi Miyata, Sanzo Miyazawa, Teruo Yasunaga

Journal:

Journal of Molecular Evolution

Year:

1979

Language:

english

File:

PDF, 952 KB

english, 1979

2

Protein stability for single substitution mutants and the extent of local compactness in the denatured state

Miyazawa, Sanzo, Jernigan, Robert L.

Journal:

Protein Engineering Design and Selection

Year:

1994

Language:

english

File:

PDF, 2.61 MB

english, 1994

3

Self-consistent estimation of inter-residue protein contact energies based on an equilibrium mixture approximation of residues

Sanzo Miyazawa, Robert L. Jernigan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1999

Language:

english

File:

PDF, 273 KB

english, 1999

4

An empirical energy potential with a reference state for protein fold and sequence recognition

Sanzo Miyazawa, Robert L. Jernigan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1999

Language:

english

File:

PDF, 147 KB

english, 1999

5

Evaluation of short-range interactions as secondary structure energies for protein fold and sequence recognition

Sanzo Miyazawa, Robert L. Jernigan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1999

Language:

english

File:

PDF, 142 KB

english, 1999

6

Equilibrium folding–unfolding pathways of model proteins: Effect of myoglobin–heme contacts

Robert L. Jernigan, Sanzo Miyazawa

Journal:

Year:

1983

Language:

english

File:

PDF, 444 KB

english, 1983

7

Cooperative ligand binding on multidimensional lattices: Bethe approximation

Journal:

Year:

1983

Language:

english

File:

PDF, 948 KB

english, 1983

8

Only dfl16, dsp2, and dq52 gene families exist in mouse immunoglobulin heavy chain diversity gene loci, of which dfl16 and dsp2 originate from the same primordial dh gene

Yoshikazu Ichihara, Hidenori Hayashida, Sanzo Miyazawa, Yoshikazu Kurosawa

Journal:

European Journal of Immunology

Year:

1989

Language:

english

File:

PDF, 631 KB

english, 1989

9

Monte Carlo calculation of the quantum J1−J2 model on the square lattice

Sanzo Miyazawa, Shigeo Homma

Journal:

Physics Letters A

Year:

1994

Language:

english

File:

PDF, 422 KB

english, 1994

10

On the optimal contact potential of proteins

Akira R. Kinjo, Sanzo Miyazawa

Journal:

Chemical Physics Letters

Year:

2008

Language:

english

File:

PDF, 124 KB

english, 2008

11

Long- and short-range interactions in native protein structures are consistent/minimally frustrated in sequence space

Sanzo Miyazawa, Robert L. Jernigan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 148 KB

english, 2003

12

Equilibrium folding pathways for model proteins

Sanzo Miyazawa, Robert L. Jernigan

Journal:

Journal of Statistical Physics

Year:

1983

Language:

english

File:

PDF, 573 KB

english, 1983

13

VOLUME AND POLARITY CHANGES ACCOMPANIED BY AMINO ACID SUBSTITUTIONS IN PROTEIN EVOLUTION

Dr. Mitiko Go, Sanzo Miyazawa

Journal:

Chemical Biology & Drug Design

Year:

1978

Language:

english

File:

PDF, 275 KB

english, 1978

14

RELATIONSHIP BETWEEN MUTABILITY, POLARITY AND EXTERIORITY OF AMINO ACID RESIDUES IN PROTEIN EVOLUTION

MITIKO GO, SANZO MIYAZAWA

Journal:

Chemical Biology & Drug Design

Year:

1980

Language:

english

File:

PDF, 887 KB

english, 1980

15

Residue – Residue Potentials with a Favorable Contact Pair Term and an Unfavorable High Packing Density Term, for Simulation and Threading

Sanzo Miyazawa, Robert L. Jernigan

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 735 KB

english, 1996

16

Properties of contact matrices induced by pairwise interactions in proteins

Miyazawa, Sanzo, Kinjo, Akira R.

Journal:

Physical Review E

Year:

2008

Language:

english

File:

PDF, 208 KB

english, 2008

17

Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation

Miyazawa, Sanzo, Jernigan, Robert L.

Journal:

Year:

1985

Language:

english

File:

PDF, 2.20 MB

english, 1985

18

Properties Of Contact Matrices Induced By Pairwise Interactions In Proteins

Miyazawa, Sanzo, Kinjo, Akira R.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 35 KB

english, 2009

19

Superiority of a mechanistic codon substitution model even for protein sequences in Phylogenetic analysis

Journal:

BMC Evolutionary Biology

Year:

2013

Language:

english

File:

PDF, 220 KB

english, 2013

20

Most probable intermediates in protein folding-unfolding with a noninteracting globule-coil model

Miyazawa, Sanzo, Jernigan, Robert L.

Journal:

Year:

1982

Language:

english

File:

PDF, 2.04 MB

english, 1982

21

Statistical mechanics of supercoiling-induced B-to-Z transitions in a closed circular DNA: One-dimensional model system with a double quadratic displacement potential and long range interactions

Miyazawa, Sanzo

Journal:

The Journal of Chemical Physics

Year:

1985

Language:

english

File:

PDF, 2.08 MB

english, 1985

22

How effective for fold recognition is a potential of mean force that includes relative orientations between contacting residues in proteins?

Miyazawa, Sanzo, Jernigan, Robert L.

Journal:

The Journal of Chemical Physics

Year:

2005

Language:

english

File:

PDF, 514 KB

english, 2005

23

A new substitution matrix for protein sequence searches based on contact frequencies in protein structures

Miyazawa, Sanzo, Jernigan, Robert L.

Journal:

Protein Engineering Design and Selection

Year:

1993

Language:

english

File:

PDF, 1.10 MB

english, 1993

24

A reliable sequence alignment method based on probabilities of residue correspondences

Miyazawa, Sanzo

Journal:

Protein Engineering Design and Selection

Year:

1995

Language:

english

File:

PDF, 1.01 MB

english, 1995

25

Prediction of Residue-Contacts Based on Coevolution between Amino Acid Sites: Toward the Prediction of Protein Structure

MIYAZAWA, Sanzo

Journal:

Seibutsu Butsuri

Year:

2014

File:

PDF, 577 KB

2014

26

Selection maintaining protein stability at equilibrium

Miyazawa, Sanzo

Journal:

Journal of Theoretical Biology

Year:

2016

Language:

english

File:

PDF, 2.65 MB

english, 2016

27

A Modified Decoupled Cell Method of Quantum Monte Carlo Calculation

Miyazawa, Sanzo, Miyashita, Seiji, Makivic, Miloje S., Homma, Shigeo

Journal:

Progress of Theoretical Physics

Year:

1993

Language:

english

File:

PDF, 658 KB

english, 1993

28

Selection Maintaining Protein Stability at Equilibrium

Miyazawa, Sanzo

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 59 KB

english, 2017

29

Selection originating from protein stability/foldability: Relationships between protein folding free energy, sequence ensemble, and fitness

Miyazawa, Sanzo

Journal:

Journal of Theoretical Biology

Year:

2017

Language:

english

File:

PDF, 1.08 MB

english, 2017

30

3P306 Selective Constraints on Amino Acids Estimated by a Mechanistic Codon Substitution Model with Multiple Nucleotide Changes(Bioinformatics: Molecular evolution,The 48th Annual Meeting of the Biophysical Society of Japan)

Miyazawa, Sanzo

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 231 KB

english, 2010

31

2PT007 Prediction of Contact Residue Sites Based on Concurrent and Compensatory Substitutions Between Sites in Protein Evolution(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyazawa, Sanzo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

32

Selective Constraints on Amino Acids Estimated by a Mechanistic Codon Substitution Model with Multiple Nucleotide Changes

Miyazawa, Sanzo, Martin, Darren

Journal:

Year:

2011

Language:

english

File:

PDF, 652 KB

english, 2011

33

Prediction of Contact Residue Pairs Based on Co-Substitution between Sites in Protein Structures

Miyazawa, Sanzo, Robinson-Rechavi, Marc

Journal:

Year:

2013

Language:

english

File:

PDF, 760 KB

english, 2013

34

3P-301 A Codon-based Model for Evolution of Protein-coding DNA Sequences(The 46th Annual Meeting of the Biophysical Society of Japan)

Miyazawa, Sanzo

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 291 KB

english, 2008